miRBase entry: xtr-mir-181b-1

Stem-loop xtr-mir-181b-1


Accession
MI0004849
Description
Xenopus tropicalis xtr-mir-181b-1 precursor miRNA
Gene family
MIPF0000007; mir-181


Sequence

aaggucacaaucAACAUUCAUUGCUGUCGGUGGGuugaguuaagaacacaagcucgcugaacgaugaaugcaacugugucccc
..((.((((.....(((((((((...((((((((((..(((...)))...)))))))))).)))))))))....)))).))..

Structure
aa  u    aucAA         CUG          -ga   a 
  gg caca     CAUUCAUUG   UCGGUGGGuu   guu  
  || ||||     |||||||||   ||||||||||   ||| a
  cc gugu     guaaguagc   agucgcucga   caa  
cc  u    -caac         --a          aca   g 


Annotation confidence Not enough data
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Genome context
chr4: 101423391-101423473 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-181b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xtr-miR-181b

Accession MIMAT0003609
Description Xenopus tropicalis xtr-miR-181b mature miRNA
Sequence 13 - AACAUUCAUUGCUGUCGGUGGG - 34
Evidence not_experimental

References