Stem-loop xtr-mir-202-1

Accession

MI0004860

Description

Xenopus tropicalis xtr-mir-202-1 precursor miRNA

Gene family

MIPF0000121; mir-202

Sequence

cucgcuguuccuuUUUCCUAUGCAUAUACCUCUUUgaaaaaugaauguaaAGGGGCAUAGGGCAUGGGAAAAuggcgcagcugagcc
((((((((.((.(((((((((((.(((.((((((((...........)))))))).)))..))))))))))).)).))))).)))..

Structure

--   -     u  u           -A   A        aaaa 
  cuc gcugu cc uUUUCCUAUGC  UAU CCUCUUUg    a
  ||| ||||| || |||||||||||  ||| ||||||||    u
  gag cgacg gg AAAAGGGUACG  AUA GGGGAaau    g
cc   u     c  u           GG   C        guaa 

Annotation confidence Not enough data

Genome context

chr7: 18586257-18586343 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xtr-mir-202-1

Mature xtr-miR-202-5p

• Accession: MIMAT0003620
• Description: Xenopus tropicalis xtr-miR-202-5p mature miRNA
• Sequence: 14 - UUUCCUAUGCAUAUACCUCUUU - 35
• Evidence: not_experimental

Mature xtr-miR-202-3p

• Accession: MIMAT0003621
• Description: Xenopus tropicalis xtr-miR-202-3p mature miRNA
• Sequence: 51 - AGGGGCAUAGGGCAUGGGAAAA - 72
• Evidence: not_experimental

References