miRBase entry: xtr-mir-206

Stem-loop xtr-mir-206


Accession
MI0004863
Description
Xenopus tropicalis xtr-mir-206 precursor miRNA
Gene family
MIPF0000038; mir-1


Sequence

gaggucacaugcuucuuuauauacccauaugaacuacauuguuaUGGAAUGUAAGGAAGUGUGUGGcuuc
((((((((((((((((((((((..(((((...((......))))))).))))))))))))))))))))))

Structure
                      ac     uga  ua 
gaggucacaugcuucuuuauau  ccaua   ac  c
||||||||||||||||||||||  |||||   ||   
cuucGGUGUGUGAAGGAAUGUA  GGUau   ug  a
                      -A     ---  uu 


Annotation confidence Not enough data
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Genome context
KV460357.1: 1079506-1079575 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-206
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xtr-miR-206

Accession MIMAT0003623
Description Xenopus tropicalis xtr-miR-206 mature miRNA
Sequence 45 - UGGAAUGUAAGGAAGUGUGUGG - 66
Evidence experimental
Northern [1]

References

  1. PubMed ID: 18032731
    Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
    "Tang GQ, Maxwell ES"
    "Genome Res (2008) 18:104-112