Stem-loop xtr-mir-301-1

Accession

MI0004876

Description

Xenopus tropicalis xtr-mir-301-1 precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

cugcuaaugugugcucugacuuuauugcacuacuguacuauacagcuagCAGUGCAAUAGUAUUGUCAAAGCaucugcaagcag
(((((..((((((((.((((.((((((((((.((((........)).)).))))))))))....)))).)))))..))))))))

Structure

     aa   --     c    ---u          a  -  acu 
cugcu  ugu  gugcu ugac    uuauugcacu cu gu   a
|||||  |||  ||||| ||||    |||||||||| || ||    
gacga  acg  uaCGA ACUG    GAUAACGUGA ga cg   u
     --   uc     A    UUAU          C  u  aca 

Annotation confidence Not enough data

Genome context

chr2: 91417649-91417732 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xtr-mir-301-1

Mature xtr-miR-301

• Accession: MIMAT0003635
• Description: Xenopus tropicalis xtr-miR-301 mature miRNA
• Sequence: 50 - CAGUGCAAUAGUAUUGUCAAAGC - 72
• Evidence: not_experimental

References