Stem-loop xtr-mir-301-2

Accession

MI0004877

Description

Xenopus tropicalis xtr-mir-301-2 precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

gaauugcucugacaguguugcacuacugugaucucaaaugaagCAGUGCAAUAGUAUUGUCAAAGCauuucau
(((.((((.(((((((((((((((.((..............)).))))))))...))))))).)))).)))..

Structure

--   u    c       ---        a  gugauc 
  gaa ugcu ugacagu   guugcacu cu      u
  ||| |||| |||||||   |||||||| ||       
  cuu aCGA ACUGUUA   UAACGUGA ga      c
ua   u    A       UGA        C  aguaaa 

Annotation confidence Not enough data

Genome context

chr1: 145402708-145402780 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from xtr-mir-301-2

Mature xtr-miR-301

• Accession: MIMAT0003635
• Description: Xenopus tropicalis xtr-miR-301 mature miRNA
• Sequence: 44 - CAGUGCAAUAGUAUUGUCAAAGC - 66
• Evidence: not_experimental

References