miRBase entry: xtr-mir-29a

Stem-loop xtr-mir-29a


Accession
MI0004897
Description
Xenopus tropicalis xtr-mir-29a precursor miRNA
Gene family
MIPF0000009; mir-29


Sequence

acccuuuuaaaggaugacugauuucuucugguguucagagucuuuuguuuucUAGCACCAUUUGAAAUCGGUUauaaugauggggua
(((((.(((....((((((((((((...(((((((.((((.........)))))))))))...))))))))))))..))).))))).

Structure
-     u   aagg            uuc       c    ucu 
 acccu uua    augacugauuuc   ugguguu agag   u
 ||||| |||    ||||||||||||   ||||||| ||||   u
 ugggg agu    uaUUGGCUAAAG   ACCACGA Ucuu   u
a     u   --aa            UUU       -    uug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 75124877-75124963 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-29a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xtr-miR-29a

Accession MIMAT0003656
Description Xenopus tropicalis xtr-miR-29a mature miRNA
Sequence 53 - UAGCACCAUUUGAAAUCGGUU - 73
Evidence not_experimental

References