miRBase entry: xtr-mir-30d

Stem-loop xtr-mir-30d


Accession
MI0004898
Description
Xenopus tropicalis xtr-mir-30d precursor miRNA
Gene family
MIPF0000005; mir-30


Sequence

aguuugucgcUGUAAACAUCCCCGACUGGAAGcugugaggcugcauuugagcuuucagucugguguuugcugcuaccggcu
((((.((.((.(((((((((...((((((((((((((......)))...))))))))))).))))))))).)).)).))))

Structure
    u  c  U         CCC           ---   ag 
aguu gu gc GUAAACAUC   GACUGGAAGcu   gug  g
|||| || || |||||||||   |||||||||||   |||   
ucgg ca cg cguuugugg   cugacuuucga   uac  c
    c  u  u         --u           guu   gu 


Annotation confidence Not enough data
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Genome context
chr6: 126121129-126121209 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-30d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xtr-miR-30d

Accession MIMAT0003657
Description Xenopus tropicalis xtr-miR-30d mature miRNA
Sequence 11 - UGUAAACAUCCCCGACUGGAAG - 32
Evidence not_experimental

References