Stem-loop xtr-mir-93a

Accession

MI0004900

Description

Xenopus tropicalis xtr-mir-93a precursor miRNA

Gene family

MIPF0000001; mir-17

Sequence

augggcuucAAAGUGCUGUUCGUGCAGGUAGcuuaauaacagaccuacugcaugggcggcacuucccaagccc
..((((((..(((((((((((((((((.(((.((.......)).))))))))))))))))))))...))))))

Structure

au      -cA                 G   c  aa 
  gggcuu   AAGUGCUGUUCGUGCAG UAG uu  u
  ||||||   ||||||||||||||||| ||| ||  a
  cccgaa   uucacggcggguacguc auc ag  a
--      ccc                 -   c  ac 

Annotation confidence Not enough data

Genome context

KV460378.1: 107132-107204 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from xtr-mir-93a

Mature xtr-miR-93a

• Accession: MIMAT0003659
• Description: Xenopus tropicalis xtr-miR-93a mature miRNA
• Sequence: 10 - AAAGUGCUGUUCGUGCAGGUAG - 31
• Evidence: experimental ; Northern [1]

References

1. PubMed ID: 18032731
   Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
   "Tang GQ, Maxwell ES"
   "Genome Res (2008) 18:104-112