miRBase entry: xtr-let-7e-1

Stem-loop xtr-let-7e-1


Accession
MI0004907
Description
Xenopus tropicalis xtr-let-7e-1 precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

cccugugggaUGAGGUAGUAGGUUGUUUAGUUauugggccgcacccaccaaugggagagaacuacacaaccuacugucucuccuaaagug
..((.(((((.(((((((((((((((.(((((..((((.....))))((....))....))))).)))))))))))))))))))).))..

Structure
cc  g     U               U     ----------au    c 
  cu uggga GAGGUAGUAGGUUGU UAGUU            uggg c
  || ||||| ||||||||||||||| |||||            |||| g
  ga auccu cucugucauccaaca aucaa            accc c
gu  a     -               c     gagaggguaacc    a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature xtr-let-7e

Accession MIMAT0003666
Description Xenopus tropicalis xtr-let-7e mature miRNA
Sequence 11 - UGAGGUAGUAGGUUGUUUAGUU - 32
Evidence experimental
Northern [1]

References

  1. PubMed ID: 18032731
    Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
    "Tang GQ, Maxwell ES"
    "Genome Res (2008) 18:104-112