Stem-loop sequence xtr-mir-16b

AccessionMI0004910
DescriptionXenopus tropicalis miR-16b stem-loop
Gene family MIPF0000006; mir-15
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled mir-16_microRNA_precursor_family. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

The miR-16 microRNA precursor family is a group of related small non-coding RNA genes that regulates gene expression. miR-16, miR-15, mir-195 and miR-457 are related microRNA precursor sequences from the mir-15 gene family. This microRNA family appears to be vertebrate specific and its members have been predicted or experimentally validated in a wide range of vertebrate species (MIPF0000006).

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Stem-loop
   aa    uc   auu     c   ua         u --a     
5'   uugc  cgc   agcag acg  aauauuggg g   uaug 
     ||||  |||   ||||| |||  ||||||||| |   ||| a
3'   aacg  gug   ucguc ugu  uuaugaccc c   guau 
   gg    gu   aau     a   ua         - gag     
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Confidence
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Genome context
Coordinates (JGI4.2) Overlapping transcripts
GL172686.1: 1231071-1231154 [-]
sense
ENSXETT00000019103 ; smc4-201; intron 5
Clustered miRNAs
< 10kb from xtr-mir-16b
xtr-mir-15bGL172686.1: 1231228-1231315 [-]
xtr-mir-16bGL172686.1: 1231071-1231154 [-]

Mature sequence xtr-miR-16b

Accession MIMAT0003668
Sequence

14 - 

uagcagcacguaaauauugggu

 - 35

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Evidence by similarity; MI0000844
Predicted targets