Stem-loop xtr-mir-29c

Accession

MI0004918

Description

Xenopus tropicalis xtr-mir-29c precursor miRNA

Gene family

MIPF0000009; mir-29

Sequence

ucccuuacacaggaUGACCGAUCUCUCUUGGUGUUCagaggcucaggucuucaucUAGCACCAUUUGAAAUCGGUuauaauguaagguga
(((((((((....(((((((((.((...(((((((..(((((....))))).....)))))))...)).)))))))))..))))))).))

Structure

  -       cagg         C  UCU       ---Ca     u 
uc ccuuaca    aUGACCGAU UC   UGGUGUU     gaggc c
|| |||||||    ||||||||| ||   |||||||     |||||  
ag ggaaugu    uauUGGCUA AG   ACCACGA     uucug a
  u       --aa         A  UUU       Ucuac     g 

Annotation confidence Not enough data

Genome context

chr2: 48076534-48076623 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xtr-mir-29c

Mature xtr-miR-29c-5p

• Accession: MIMAT0003676
• Description: Xenopus tropicalis xtr-miR-29c-5p mature miRNA
• Sequence: 15 - UGACCGAUCUCUCUUGGUGUUC - 36
• Evidence: not_experimental

Mature xtr-miR-29c-3p

• Accession: MIMAT0003677
• Description: Xenopus tropicalis xtr-miR-29c-3p mature miRNA
• Sequence: 56 - UAGCACCAUUUGAAAUCGGU - 75
• Evidence: not_experimental

References