miRBase entry: xtr-mir-30c-2

Stem-loop xtr-mir-30c-2


Accession
MI0004919
Description
Xenopus tropicalis xtr-mir-30c-2 precursor miRNA
Gene family
MIPF0000005; mir-30


Sequence

gagagacagauacUGUAAACAUCCUACACUCUCAGCuguggaaauacaaagcugggggaaggcuguuuacucucucug
((((((........(((((((.(((...(((((((((.((......)).))))))))).))).)))))))))))))..

Structure
--      cagauacU       U   ACA         g  ga 
  gagaga        GUAAACA CCU   CUCUCAGCu ug  a
  ||||||        ||||||| |||   ||||||||| ||   
  cucucu        cauuugu gga   gggggucga ac  a
gu      --------       c   --a         a  au 


Annotation confidence Not enough data
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Genome context
chr5: 91680390-91680467 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-30c-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xtr-miR-30c

Accession MIMAT0003577
Description Xenopus tropicalis xtr-miR-30c mature miRNA
Sequence 14 - UGUAAACAUCCUACACUCUCAGC - 36
Evidence not_experimental

References