Stem-loop xtr-mir-30e

Accession

MI0004920

Description

Xenopus tropicalis xtr-mir-30e precursor miRNA

Gene family

MIPF0000005; mir-30

Sequence

gggcaguuacagccucUGUAAACAUCCUUGACUGGAAGcugugaaauaaugauaguagcuuucagucggauguuuacagcugcuagcugc
..(((((((((((...(((((((((((..((((((((((((..............))))))))))))))))))))))))))).)))))))

Structure

gg       -    cuc           UU            ugaaau 
  gcaguua cagc   UGUAAACAUCC  GACUGGAAGcug      a
  ||||||| ||||   |||||||||||  ||||||||||||       
  cgucgau gucg   acauuuguagg  cugacuuucgau      a
--       c    ---           --            gauagu 

Annotation confidence Not enough data

Genome context

chr2: 83741892-83741981 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xtr-mir-30e

Mature xtr-miR-30e

• Accession: MIMAT0003678
• Description: Xenopus tropicalis xtr-miR-30e mature miRNA
• Sequence: 17 - UGUAAACAUCCUUGACUGGAAG - 38
• Evidence: not_experimental

References