miRBase entry: xtr-mir-100

Stem-loop xtr-mir-100


Accession
MI0004927
Description
Xenopus tropicalis xtr-mir-100 precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

guugccauaAACCCGUAGAUCCGAACUUGUGcugugccccucucacaagcucgagugugcgggucugugucggcuu
((((.((((.(((((((.((.(((.((((((..(.......).)))))).))).)).))))))).)))).))))..

Structure
--    c    A       G  C   A      cu ug 
  guug caua ACCCGUA AU CGA CUUGUG  g  c
  |||| |||| ||||||| || ||| ||||||  |  c
  cggc gugu ugggcgu ug gcu gaacac  c  c
uu    u    c       g  a   c      -u uc 


Annotation confidence Not enough data
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Genome context
chr7: 112711713-112711788 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-100
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xtr-miR-100

Accession MIMAT0003682
Description Xenopus tropicalis xtr-miR-100 mature miRNA
Sequence 10 - AACCCGUAGAUCCGAACUUGUG - 31
Evidence not_experimental

References