miRBase entry: xtr-mir-212

Stem-loop xtr-mir-212


Accession
MI0004952
Description
Xenopus tropicalis xtr-mir-212 precursor miRNA
Gene family
MIPF0000065; mir-132


Sequence

uggucauugcaucggcaccuuggcucuagacugcuuacugugaaacugugcuauaggaacagUAACAGUCUACAGUCAUGGCUacugacguaugac
..(((((.((.((((..((.(((((.(((((((.(((((((....((((...))))..)))))))))))))).))))).))...)))).)))))))

Structure
ug     u  a    -ca  u     c       c       gaaa    g 
  gucau gc ucgg   cc uggcu uagacug uuacugu    cugu  
  ||||| || ||||   || ||||| ||||||| |||||||    |||| c
  cagua ug aguc   GG ACUGA AUCUGAC AAUgaca    gaua  
--     -  c    aUC  U     C       -       --ag    u 


Annotation confidence Not enough data
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Genome context
chr2: 27657630-27657725 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-212
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xtr-miR-212

Accession MIMAT0003699
Description Xenopus tropicalis xtr-miR-212 mature miRNA
Sequence 63 - UAACAGUCUACAGUCAUGGCU - 83
Evidence not_experimental

References