Stem-loop tni-mir-10d

Accession

MI0004966

Description

Tetraodon nigroviridis tni-mir-10d precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

gccggugaggugcucgucgucuauacaUACCCUGUAGAACCGAAUGUGUGUGcagcugacuugaucacagauuggguucuaggggagucuaugggcgcugaauaaucaucgaugaacggc
..((((((.....(((.((((((((...(((((.(((((((.(((.((((..(((.....)))..)))).))).))))))).))).)).)))))))).)))....)))))).........

Structure

-------gc      ggugc   u        caU  -   G       G   G    UG   c 
         cgguga     ucg cgucuaua   AC CCU UAGAACC AAU UGUG  cag u
         ||||||     ||| ||||||||   || ||| ||||||| ||| ||||  ||| g
         gcuacu     agu gcggguau   ug ggg aucuugg uua acac  guu a
cggcaagua      -aaua   c        --c  a   g       g   g    ua   c 

Annotation confidence Not enough data

Genome context

17: 9715774-9715893 [+]

Mature tni-miR-10d

• Accession: MIMAT0003772
• Description: Tetraodon nigroviridis tni-miR-10d mature miRNA
• Sequence: 28 - UACCCUGUAGAACCGAAUGUGUGUG - 52
• Evidence: not_experimental

References

1. PubMed ID: 16736008
   The zebrafish hoxDb cluster has been reduced to a single microRNA
   "Woltering JM, Durston AJ"
   "Nat Genet (2006) 38:601-602