miRBase entry: fru-mir-10d

Stem-loop fru-mir-10d


Accession
MI0004967
Description
Fugu rubripes fru-mir-10d precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

ccggugagguggaucgucgucuauaaaUACCCUGUAGAACCGAAUGUGUGUGcagcugacuugaucacagauuggguucuaggggagucuaugggcgaugaauaaucacuga
.((((((......((((((((((((...(((((.(((((((.(((.((((..(((.....)))..)))).))).))))))).))).)).))))))))))))....)))))).

Structure
c      ggugga            aaU  -   G       G   G    UG   c 
 cgguga      ucgucgucuaua   AC CCU UAGAACC AAU UGUG  cag u
 ||||||      ||||||||||||   || ||| ||||||| ||| ||||  ||| g
 gucacu      aguagcggguau   ug ggg aucuugg uua acac  guu a
a      --aaua            --c  a   g       g   g    ua   c 


Annotation confidence Not enough data
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Genome context
HE602538.1: 6154010-6154121 [-]

Database links

Mature fru-miR-10d

Accession MIMAT0003773
Description Fugu rubripes fru-miR-10d mature miRNA
Sequence 28 - UACCCUGUAGAACCGAAUGUGUGUG - 52
Evidence not_experimental

References

  1. PubMed ID: 16736008
    The zebrafish hoxDb cluster has been reduced to a single microRNA
    "Woltering JM, Durston AJ"
    "Nat Genet (2006) 38:601-602