Stem-loop sequence bmo-mir-14

Accession MI0004974
Description Bombyx mori miR-14 stem-loop
Gene family MIPF0000182; mir-14
Stem-loop 
u       ug   c           uc   ga     uu 
 ugucauu  ugu ggggagagaaa  gac  ggcug  u
 |||||||  ||| |||||||||||  |||  |||||  u
 acaguga  aua ccucucucuuu  cug  cugau  a
u       gu   u           uu   -a     uu
Get sequence
Deep sequencing
2366 reads, 3 experiments
Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
nscaf3040: 1271367-1271446 [-]
intergenic

Mature sequence bmo-miR-14-5p

Accession MIMAT0015227
Previous IDs bmo-miR-14*
Sequence

14 -  

cggggagagaaaucgacgaggcu

 - 36

Get sequence
Deep sequencing 403 reads, 3 experiments
Evidence experimental; Solexa [3]

Mature sequence bmo-miR-14-3p

Accession MIMAT0004196
Previous IDs bmo-miR-14
Sequence

48 -  

ucagucuuuuucucucuccua

 - 68

Get sequence
Deep sequencing 1963 reads, 3 experiments
Evidence experimental; Northern [2], Solexa [3]

References

1
PMID:16972323 "Computational prediction of microRNA genes in silkworm genome" Tong CZ, Jin YF, Zhang YZ J Zhejiang Univ Sci B. 7:806-816(2006).
2
PMID:18507836 "Identification and characteristics of microRNAs from Bombyx mori" He PA, Nie Z, Chen J, Chen J, Lv Z, Sheng Q, Zhou S, Gao X, Kong L, Wu X, Jin Y, Zhang Y BMC Genomics. 9:248(2008).
3
PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).