Accession
MI0004975
Description
Bombyx mori
bmo-mir-34 precursor miRNA
Gene family
MIPF0000039;
mir-34
Literature search
5 open access papers mention bmo-mir-34
(8 sentences)
(8 sentences)
Sequence
1236
reads,
267
reads per million, 3 experiments
agaaucaggguagaccgcguUGGCAGUGUGGUUAGCUGGUUGuguauggaaaugacaacAGCCACUAACGACACUGCUCCUgcgugcacccuaaauca
.((...(((((.(..((((..((((((((.(((((.(((((((((((....)).)).)))))))))))).))))))))..))))..))))))...)).
.((...(((((.(..((((..((((((((.(((((.(((((((((((....)).)).)))))))))))).))))))))..))))..))))))...)).
Structure
a auc a ac uU G C - - g ga agggu g cgcg GGCAGUGU GUUAG UGGUUGu gu au g || ||||| | |||| |||||||| ||||| ||||||| || || cu uccca c gcgU UCGUCACA CAAUC ACCGAca ca ua a a aaa - gu CC G - a g a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
NW_004581681.1: 3813355-3813452 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-34
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bmo-miR-34-5p
| Accession | MIMAT0004197 |
| Description | Bombyx mori bmo-miR-34-5p mature miRNA |
| Sequence | 21 - UGGCAGUGUGGUUAGCUGGUUG - 42 |
| Evidence |
experimental
RT-PCR [3], Illumina [4] |
| Database links |
|
Mature bmo-miR-34-3p
| Accession | MIMAT0015228 |
| Description | Bombyx mori bmo-miR-34-3p mature miRNA |
| Sequence | 60 - AGCCACUAACGACACUGCUCCU - 81 |
| Evidence |
experimental
Illumina [4] |
| Database links |
|
References
|
