Stem-loop sequence mmu-mir-490

Accession MI0005002
Symbol MGI:Mir490
Description Mus musculus miR-490 stem-loop
Gene family MIPF0000229; mir-490
Stem-loop 
uggaaaguucauugu      c      --         g   cac  uua 
               ucgaca caugga  ucuccaggu ggu   gu   g
               |||||| ||||||  ||||||||| |||   ||    
               aguugu guaccu  ggaggucca cca   ca   a
---------------      c      ca         a   ---  uau
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Deep sequencing
1119 reads, 30 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr6: 36421742-36421825 [+]
sense
OTTMUST00000094559 ; Chrm2-002; intron 2
OTTMUST00000094551 ; Chrm2-001; intron 2
ENSMUST00000169004 ; Chrm2-002; intron 2
ENSMUST00000172278 ; Chrm2-001; intron 2
Database links

Mature sequence mmu-miR-490-5p

Accession MIMAT0017261
Sequence

22 -  

ccauggaucuccaggugggu

 - 41

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Deep sequencing 415 reads, 20 experiments
Evidence experimental; Solexa [3]
Predicted targets

Mature sequence mmu-miR-490-3p

Accession MIMAT0003780
Previous IDs mmu-miR-490
Sequence

59 -  

caaccuggaggacuccaugcug

 - 80

Get sequence
Deep sequencing 704 reads, 28 experiments
Evidence experimental; MPSS [1], Solexa [2-3]
Predicted targets

References

1
PMID:16582102 "The expression profile of microRNAs in mouse embryos" Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I Nucleic Acids Res. 34:1765-1771(2006).
2
PMID:20215419 "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing" Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A Mol Hum Reprod. 16:463-471(2010).
3
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).