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miRBase |
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Stem-loop sequence bta-mir-380 |
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Accession | MI0005021 (change log) | |||||||||||||||||||||||||||||||
Description | Bos taurus miR-380 stem-loop | |||||||||||||||||||||||||||||||
Gene family | MIPF0000126; mir-379 | |||||||||||||||||||||||||||||||
Literature search |
1 open access papers mention bta-mir-380 | |||||||||||||||||||||||||||||||
Stem-loop |
guu ga - ugu 5' aagaug gaccaua acaugcg c c |||||| ||||||| ||||||| | u 3' uucugc cuggugu uguaugc g c -ac aa u uau |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence bta-miR-380-5p |
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Accession | MIMAT0003803 |
Sequence |
5 - ugguugaccauagaacaugcgc - 26 |
Deep sequencing | 6 reads, 6 experiments |
Evidence | experimental; Array [2], qRT-PCR [2] |
Predicted targets |
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Mature sequence bta-miR-380-3p |
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Accession | MIMAT0003804 |
Sequence |
40 - uauguaaugugguccacgucu - 60 |
Deep sequencing | 8296 reads, 63 experiments |
Evidence | experimental; cloned [1] |
Predicted targets |
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References |
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1 |
PMID:17105755
"Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues"
Physiol Genomics. 29:35-43(2007).
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2 |
PMID:19170227
"Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach"
Mol Reprod Dev. 76:665-677(2009).
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