Stem-loop bta-mir-487a

Accession

MI0005022

Description

Bos taurus bta-mir-487a precursor miRNA

Gene family

MIPF0000018; mir-154

Literature search

2 open access papers mention bta-mir-487a
(4 sentences)

Sequence

301 reads, 9 reads per million, 59 experiments

gguacuugaagagugguuaucccugcuguguucgcuguauuuaugacgAAUCAUACAGGGACAUCCAGUuuuucaguauc
((((((.(((((.(((...((((((.(((((((((.........).)))).))))))))))...))).))))).))))))

Structure

      u     g   uua      c    -    - ugu 
gguacu gaaga ugg   ucccug ugug uucg c   a
|||||| ||||| |||   |||||| |||| |||| |   u
cuauga uuuuU ACC   AGGGAC AUAC AAgc g   u
      c     G   UAC      -    U    a uau 

Annotation confidence High

Genome context

chr21: 67868237-67868316 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from bta-mir-487a

Mature bta-miR-487a

• Accession: MIMAT0003805
• Description: Bos taurus bta-miR-487a mature miRNA
• Sequence: 49 - AAUCAUACAGGGACAUCCAGU - 69
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43