Stem-loop bta-let-7a-1

Accession

MI0005057

Description

Bos taurus bta-let-7a-1 precursor miRNA

Literature search

79 open access papers mention bta-let-7a-1
(315 sentences)

Sequence

32548433 reads, 17577.0 reads per million, 321 experiments

ugggaUGAGGUAGUAGGUUGUAUAGUUuuagggucacacccaccacugggagauaaCUAUACAAUCUACUGUCUUUCCua
(((((.(((((((((((((((((((((.....(((...((((....)))).)))))))))))))))))))))))))))))

Structure

     U                     uuagg   aca    c 
uggga GAGGUAGUAGGUUGUAUAGUU     guc   ccca c
||||| |||||||||||||||||||||     |||   ||||  
auCCU UUCUGUCAUCUAACAUAUCaa     uag   gggu a
     -                     -----   --a    c 

Annotation confidence High

Genome context

8: 85450397-85450476 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from bta-let-7a-1

Mature bta-let-7a-5p

• Accession: MIMAT0003844
• Description: Bos taurus bta-let-7a-5p mature miRNA
• Sequence: 6 - UGAGGUAGUAGGUUGUAUAGUU - 27
• Evidence: experimental ; cloned [1]

Mature bta-let-7a-3p

• Accession: MIMAT0004330
• Description: Bos taurus bta-let-7a-3p mature miRNA
• Sequence: 57 - CUAUACAAUCUACUGUCUUUCC - 78
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988