miRBase entry: bta-mir-150

Stem-loop bta-mir-150


Accession
MI0005058
Description
Bos taurus bta-mir-150 precursor miRNA
Gene family
MIPF0000197; mir-150

Literature search
13 open access papers mention bta-mir-150
(44 sentences)

Sequence

12772 reads, 182 reads per million, 64 experiments
ccucucuccucacggcccugUCUCCCAACCCUUGUACCAGUGUgugucucagacccugguacagguacggggaggcagggaccugggggaucccagcagc
....(((((.((.(((((((((((((....((((((((((.((.((...)).)).))))))))))....))))))))))).)))))))))..........

Structure
------ccuc     u  c  -           AACC          U  g  u 
          ucucc ca gg cccugUCUCCC    CUUGUACCAG GU ug  
          ||||| || || |||||||||||    |||||||||| || || c
          agggg gu cc gggacggaggg    ggacaugguc ca ac  
cgacgacccu     -  -  a           gcau          c  g  u 


Annotation confidence Not enough data
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Genome context
chr18: 56646623-56646722 [-]

Database links

Mature bta-miR-150

Accession MIMAT0003845
Description Bos taurus bta-miR-150 mature miRNA
Sequence 21 - UCUCCCAACCCUUGUACCAGUGU - 43
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17105755
    Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
    "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
    "Physiol Genomics (2007) 29:35-43