miRBase entry: bta-mir-363

Stem-loop bta-mir-363


Accession
MI0005069
Description
Bos taurus bta-mir-363 precursor miRNA
Gene family
MIPF0000138; mir-363

Literature search
6 open access papers mention bta-mir-363
(15 sentences)

Sequence

4944 reads, 170 reads per million, 71 experiments
uguugucggguggaucacgaugcaauuuugauuaguauaauaggagaaaaAUUGCACGGUAUCCAUCUGCGaac
.(((..(((((((((..((.(((((((((..(((......)))....)))))))))))..)))))))))..)))

Structure
u   gu         ca  a         --ga   gu 
 guu  cggguggau  cg ugcaauuuu    uua  a
 |||  |||||||||  || |||||||||    |||   
 caa  GUCUACCUA  GC ACGUUAaaa    gau  u
-   GC         UG  -         agag   aa 


Annotation confidence High
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Genome context
chrX: 18021032-18021105 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from bta-mir-363
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-363

Accession MIMAT0003855
Description Bos taurus bta-miR-363 mature miRNA
Sequence 51 - AUUGCACGGUAUCCAUCUGCG - 71
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17105755
    Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
    "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
    "Physiol Genomics (2007) 29:35-43