Accession
MI0005085
Description
Oryza sativa
osa-MIR395n precursor miRNA
Gene family
MIPF0000016;
MIR395
Literature search
40 open access papers mention osa-MIR395n
(168 sentences)
(168 sentences)
Sequence
42
reads,
33
reads per million, 2 experiments
gaguucccuucaagcacuucacgacgcacuauuuagagaguuguuGUGAAGUGUUUGGGGGAACUC
(((((((((.((((((((((((((((.(((........))))))))))))))))))))))))))))
(((((((((.((((((((((((((((.(((........))))))))))))))))))))))))))))
Structure
u c auu
gaguucccu caagcacuucacgacg acu u
||||||||| |||||||||||||||| |||
CUCAAGGGG GUUUGUGAAGUGuugu uga a
- - gag
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Four clusters of rice miR395 genes are found on chromosomes 4, 8 and 9, and the gene names have been rationalised to reflect this arrangement [1].
Genome context
Chr4: 32622243-32622308 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from osa-MIR395n
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature osa-miR395n
| Accession | MIMAT0003871 |
| Description | Oryza sativa osa-miR395n mature miRNA |
| Sequence | 46 - GUGAAGUGUUUGGGGGAACUC - 66 |
| Evidence | not_experimental |
| Database links |
|
References
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