Stem-loop osa-MIR395q

Accession

MI0005088

Description

Oryza sativa osa-MIR395q precursor miRNA

Literature search

39 open access papers mention osa-MIR395q
(166 sentences)

Sequence

29 reads, 20 reads per million, 2 experiments

gaguucccuucaagcacuucacaugacacuauuucaaugucuauuauGUGAAGUGUUUGGGGGAACUC
(((((((((.((((((((((((((((.((.........))...)))))))))))))))))))))))))

Structure

         u                --c  uau 
gaguucccu caagcacuucacauga   ac   u
||||||||| ||||||||||||||||   ||   u
CUCAAGGGG GUUUGUGAAGUGuauu   ug   c
         -                auc  uaa 

Annotation confidence Not enough data

Comments

Four clusters of rice miR395 genes are found on chromosomes 4, 8 and 9, and the gene names have been rationalised to reflect this arrangement [1].

Genome context

Chr4: 32622668-32622735 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from osa-MIR395q

Mature osa-miR395q

• Accession: MIMAT0003874
• Description: Oryza sativa osa-miR395q mature miRNA
• Sequence: 48 - GUGAAGUGUUUGGGGGAACUC - 68
• Evidence: not_experimental

References

1. PubMed ID: 16117853
   Molecular evolution of the rice miR395 gene family
   "Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L"
   "Cell Res (2005) 15:631-638