miRBase entry: osa-MIR395r

Stem-loop osa-MIR395r


Accession
MI0005092
Description
Oryza sativa osa-MIR395r precursor miRNA
Gene family
MIPF0000016; MIR395

Literature search
39 open access papers mention osa-MIR395r
(166 sentences)

Sequence

24 reads, 17 reads per million, 2 experiments
gaguucccuucaaccacuucacguggcacuauuuuaggaccuacuauGUGAAGUGUUUGGGGGAACUC
(((((((((.(((.((((((((((((..(((...)))..))....)))))))))).))))))))))))

Structure
         u   c          ----  ca   u 
gaguucccu caa cacuucacgu    gg  cua  
||||||||| ||| ||||||||||    ||  ||| u
CUCAAGGGG GUU GUGAAGUGua    cc  gau  
         -   U          ucau  ag   u 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Four clusters of rice miR395 genes are found on chromosomes 4, 8 and 9, and the gene names have been rationalised to reflect this arrangement [1].

Genome context
Unknown

Database links

Mature osa-miR395r

Accession MIMAT0003878
Description Oryza sativa osa-miR395r mature miRNA
Sequence 48 - GUGAAGUGUUUGGGGGAACUC - 68
Evidence not_experimental
Database links

References

  1. PubMed ID: 16117853
    Molecular evolution of the rice miR395 gene family
    "Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L"
    "Cell Res (2005) 15:631-638