Stem-loop sequence ptc-MIR171k

Accession MI0005114
Description Populus trichocarpa miR171k stem-loop
Gene family MIPF0000030; MIR171_1
Stem-loop 
    c    u        c  c       uc    uga 
gaua uggc cgguucaa cu aucguag  uuga   a
|||| |||| |||||||| || |||||||  ||||    
cuau accg gccgaguu gg ugguauc  aacu   u
    a    c        a  u       ua    uag
Get sequence
Comments

This sequence is a predicted homolog of a verified miRNA in Arabidopsis (E. Bonnet, pers. comm.).

Genome context
Coordinates (JGI_Poptr2.0) Overlapping transcripts
scaffold_15: 5060947-5061024 [-]
intergenic

Mature sequence ptc-miR171k

Accession MIMAT0003943
Sequence

58 -  

ggauugagccgcgccaauauc

 - 78

Get sequence
Evidence by similarity; MI0000989