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miRBase |
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Stem-loop sequence sme-mir-124b |
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Accession | MI0005158 (change log) | ||||||
Description | Schmidtea mediterranea miR-124b stem-loop | ||||||
Gene family | MIPF0000021; mir-124 | ||||||
Literature search |
2 open access papers mention sme-mir-124b | ||||||
Stem-loop |
guau gaa - aa u - a 5' ccau aauuu gcauuuac cgugucuu agu uc u |||| ||||| |||||||| |||||||| ||| || 3' ggua uuaag cguaagug gcacggaa uca ag g auuu -aa u gc - c u |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence sme-miR-124b-5p |
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Accession | MIMAT0012113 |
Previous IDs | sme-miR-124b* |
Sequence |
16 - ugcauuuacaacgugucuuuagu - 38 |
Evidence | experimental; 454 [2], Illumina [2-3] |
Mature sequence sme-miR-124b-3p |
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Accession | MIMAT0003993 |
Previous IDs | sme-miR-124b |
Sequence |
50 - uaaggcacgcggugaaugcuga - 71 |
Evidence | experimental; cloned [1], Northern [1], 454 [2], Illumina [2] |
References |
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1 |
PMID:16849698
"MicroRNAs from the Planarian Schmidtea mediterranea: a model system for stem cell biology"
RNA. 12:1640-1649(2006).
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2 |
PMID:19564616
"High-resolution profiling and discovery of planarian small RNAs"
Proc Natl Acad Sci U S A. 106:11546-11551(2009).
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3 |
PMID:19553344
"Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea"
RNA. 15:1483-1491(2009).
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