miRBase entry: sme-mir-751

Stem-loop sme-mir-751


Accession
MI0005177
Description
Schmidtea mediterranea sme-mir-751 precursor miRNA


Sequence

acuaauuuuguuuucuuguaaacuccgauagaaugauucauaagauugacuauaaaaCAUGUUUGAAUGGCCAUGACAaaguauu
....((((((((......(((((....((((......(((......))))))).......))))).........))))))))...

Structure
acua        ---uucuug     ---uccg    aaugau   ua 
    auuuuguu         uaaac       auag      uca  a
    ||||||||         |||||       ||||      |||   
    ugaaACAG         GUUUG       uauc      agu  g
-uua        UACCGGUAA     UACaaaa    ------   ua 


Annotation confidence Not enough data
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Genome context
Contig569: 35855-35939 [+]

Database links

Mature sme-miR-751

Accession MIMAT0004018
Description Schmidtea mediterranea sme-miR-751 mature miRNA
Sequence 58 - CAUGUUUGAAUGGCCAUGACA - 78
Evidence experimental
cloned [1], 454 [2], Illumina [2]

References

  1. PubMed ID: 16849698
    MicroRNAs from the Planarian Schmidtea mediterranea: a model system for stem cell biology
    "Palakodeti D, Smielewska M, Graveley BR"
    "RNA (2006) 12:1640-1649

  2. PubMed ID: 19564616
    High-resolution profiling and discovery of planarian small RNAs
    "Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, Hirst M, Marra M, Nusbaum C, Lee WL, Jenkin JC, Sanchez Alvarado A, Kim JK, Rajewsky N"
    "Proc Natl Acad Sci U S A (2009) 106:11546-11551