miRBase entry: osa-MIR814b

Stem-loop osa-MIR814b


Accession
MI0005240
Description
Oryza sativa osa-MIR814b precursor miRNA
Gene family
MIPF0000351; MIR814

Literature search
3 open access papers mention osa-MIR814b
(8 sentences)

Sequence

115 reads, 72 reads per million, 2 experiments
accggacgagaCACUUCAUAGUACAACGAAUCUggacaugaagauucguuguacuauaaagugucucgucuggu
((((((((((((((((.((((((((((((((((........)))))))))))))))).))))))))))))))))

Structure
                C                gga 
accggacgagaCACUU AUAGUACAACGAAUCU   c
|||||||||||||||| ||||||||||||||||    
uggucugcucugugaa uaucauguugcuuaga   a
                a                agu 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
miR814 was misnamed miR573 by Luo et al [1].

Genome context
Chr2: 26341211-26341284 [+]

Database links

Mature osa-miR814b

Accession MIMAT0004056
Description Oryza sativa osa-miR814b mature miRNA
Sequence 12 - CACUUCAUAGUACAACGAAUCU - 33
Evidence experimental
cloned [1], Northern [1]
Database links

References

  1. PubMed ID: 16959252
    Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development
    "Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH"
    "FEBS Lett (2006) 580:5111-5116