miRBase entry: mdo-mir-101-1

Stem-loop mdo-mir-101-1


Accession
MI0005283
Description
Monodelphis domestica mdo-mir-101-1 precursor miRNA
Gene family
MIPF0000046; mir-101


Sequence

788597 reads, 12529 reads per million, 5 experiments
aggcugcccuggcUCAGUUAUCACAGUGCUGAUGCUguccguucucaaggUACAGUACUGUGAUAACUGAAGgauggcagcca
.(((((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....))))))).

Structure
a       cuggc                  A    guccg 
 ggcugcc     UCAGUUAUCACAGUGCUG UGCU     u
 |||||||     |||||||||||||||||| ||||      
 ccgacgg     AGUCAAUAGUGUCAUGAC AUgg     u
a       uagGA                  -    aacuc 


Annotation confidence High
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Genome context
chr2: 26267862-26267944 [+]

Database links

Mature mdo-miR-101-3p

Accession MIMAT0004098
Description Monodelphis domestica mdo-miR-101-3p mature miRNA
Sequence 51 - UACAGUACUGUGAUAACUGAAG - 72
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mdo-miR-101-1-5p

Accession MIMAT0031076
Description Monodelphis domestica mdo-miR-101-1-5p mature miRNA
Sequence 14 - UCAGUUAUCACAGUGCUGAUGCU - 36
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 17965199
    In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
    "Devor EJ, Samollow PB"
    "J Hered (2008) 99:66-72

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45