miRBase entry: mdo-mir-184

Stem-loop mdo-mir-184


Accession
MI0005308
Description
Monodelphis domestica mdo-mir-184 precursor miRNA
Gene family
MIPF0000059; mir-184


Sequence

398756 reads, 6428 reads per million, 5 experiments
ccagucacauccCCUUAUCACUUUUCCAGCCCAGCuuucuaaugcuaauuguUGGACGGAGAACUGAUAAGGGUaggugauuga
.(((((((...(((((((((.((((((.(.(((((...............))))).))))))).)))))))))...))))))).

Structure
c       auc         C      A C     uuucua 
 cagucac   cCCUUAUCA UUUUCC G CCAGC      a
 |||||||   ||||||||| |||||| | |||||      u
 guuagug   GGGAAUAGU AAGAGG C GGUug      g
a       gaU         C      - A     uuaauc 


Annotation confidence High
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Genome context
chr1: 120539101-120539184 [-]

Database links

Mature mdo-miR-184-3p

Accession MIMAT0004119
Description Monodelphis domestica mdo-miR-184-3p mature miRNA
Sequence 53 - UGGACGGAGAACUGAUAAGGGU - 74
Evidence experimental
Microarray [1], PCR [1], Illumina [2]
Database links
Predicted targets

Mature mdo-miR-184-5p

Accession MIMAT0026673
Description Monodelphis domestica mdo-miR-184-5p mature miRNA
Sequence 13 - CCUUAUCACUUUUCCAGCCCAGC - 35
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 17965199
    In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
    "Devor EJ, Samollow PB"
    "J Hered (2008) 99:66-72

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45