miRBase entry: mdo-mir-24-1

Stem-loop mdo-mir-24-1


Accession
MI0005368
Description
Monodelphis domestica mdo-mir-24-1 precursor miRNA
Gene family
MIPF0000041; mir-24


Sequence

850 reads, 16 reads per million, 5 experiments
ggugccuacugagcugauaacaguucugauuuuacacacUGGCUCAGUUCAGCAGga
....(((.(((((((((...((((..((......)).))))..))))))))).))).

Structure
ggug   a         uaa    uc  au 
    ccu cugagcuga   cagu  ug  u
    ||| |||||||||   ||||  ||   
    gGA GACUUGACU   GUca  ac  u
---a   C         -CG    -c  au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr6: 17696508-17696564 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mdo-mir-24-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-24-3p

Accession MIMAT0004175
Description Monodelphis domestica mdo-miR-24-3p mature miRNA
Sequence 40 - UGGCUCAGUUCAGCAG - 55
Evidence experimental
Microarray [1], PCR [1]
Database links
Predicted targets

References

  1. PubMed ID: 17965199
    In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
    "Devor EJ, Samollow PB"
    "J Hered (2008) 99:66-72