Accession
MI0005403
Description
Arabidopsis thaliana
ath-MIR848 precursor miRNA
Gene family
MIPF0001140;
MIR848
Literature search
2 open access papers mention ath-MIR848
(3 sentences)
(3 sentences)
Sequence
aaaacuuucagauugcacaagagaauaugaaaaaguauuaacacaagccuuauagcuuggcaaucucaugucaaauaaggaaaagaagaggaacccaagguauguuucucaucuaccuucuuUGACAUGGGACUGCCUAAGCUAaaggcuugccauguuaucacauccuucuuucauuucgucgcaaccacuuua
..........(.(((((((((.(((...(((...((..(((((((((((((.((((((((((.((((((((((((.((((...(((.(((((((.........))))))).))).)))).)))))))))))).)))).))))))))))))))...)))))..))....))).))).))).)).)))).)......
..........(.(((((((((.(((...(((...((..(((((((((((((.((((((((((.((((((((((((.((((...(((.(((((((.........))))))).))).)))).)))))))))))).)))).))))))))))))))...)))))..))....))).))).))).)).)))).)......
Structure
aaaacuuuca a - - a uau -aaa au --- a - a u aaa a cca
g uugc ac aag gaa gaa gu uaaca caagccuu uagcuu ggca ucucaugucaaa aagg aga gaggaac a
| |||| || ||| ||| ||| || ||||| |||||||| |||||| |||| |||||||||||| |||| ||| ||||||| g
c aacg ug uuu cuu cuu ca auugu guucggaa AUCGAA CCGU AGGGUACAGUuu uucc ucu cucuuug g
----auuuca c c c a --u ccua cu acc - U C c --a a uau
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr5: 4479397-4479591 [-]
Database links
Mature ath-miR848
| Accession | MIMAT0004270 |
| Description | Arabidopsis thaliana ath-miR848 mature miRNA |
| Sequence | 123 - UGACAUGGGACUGCCUAAGCUA - 144 |
| Evidence |
experimental
454 [1], Illumina [2] |
References
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