miRBase entry: cbr-mir-787

Stem-loop cbr-mir-787


Accession
MI0005420
Description
Caenorhabditis briggsae cbr-mir-787 precursor miRNA
Gene family
MIPF0000364; mir-787


Sequence

ccucaaaauggagaagaaggaaacuagacaaucuuacauagcucaaaauaaucugUAAGCUCGUCUUAGUUUUCCUCUccucucuaggga
(((.....(((((((((.(((((((((((...((((((...............))))))...))).)))))))).)))..))))))))).

Structure
-   caaaa      --   a        -   aau      uagcuc 
 ccu     uggaga  aga ggaaacua gac   cuuaca      a
 |||     ||||||  ||| |||||||| |||   ||||||      a
 ggg     aucucu  UCU CUUUUGAU CUG   GAAUgu      a
a   -----      cc   C        U   CUC      cuaaua 


Annotation confidence Not enough data
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Genome context
chrX: 5308342-5308431 [-]

Database links

Mature cbr-miR-787

Accession MIMAT0004288
Description Caenorhabditis briggsae cbr-miR-787 mature miRNA
Sequence 56 - UAAGCUCGUCUUAGUUUUCCUCU - 78
Evidence not_experimental

References

  1. PubMed ID: 17174894
    Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
    "Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP"
    "Cell (2006) 127:1193-1207