miRBase entry: cbr-mir-789

Stem-loop cbr-mir-789


Accession
MI0005423
Description
Caenorhabditis briggsae cbr-mir-789 precursor miRNA
Gene family
MIPF0000373; mir-789


Sequence

uugcccgacuucggauucacguggucauccaggcggugcacguuaaaagauauaaauGCCCUGCCUGGGUCACCAUGUGAauagggaauacgguca
.((.(((..(((..(((((((((((.((((((((((.(((................))).)))))))))).)))))))))))...)))..))).))

Structure
u  c   ac   -gg           c          u   cguuaaa 
 ug ccg  uuc   auucacguggu auccaggcgg gca       a
 || |||  |||   ||||||||||| |||||||||| |||        
 ac ggc  aag   uaAGUGUACCA UGGGUCCGUC CGu       g
-  u   au   gga           C          C   aaauaua 


Annotation confidence Not enough data
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Genome context
chrV: 3561062-3561157 [+]

Database links

Mature cbr-miR-789

Accession MIMAT0004291
Description Caenorhabditis briggsae cbr-miR-789 mature miRNA
Sequence 58 - GCCCUGCCUGGGUCACCAUGUGA - 80
Evidence not_experimental

References

  1. PubMed ID: 17174894
    Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
    "Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP"
    "Cell (2006) 127:1193-1207