miRBase entry: cbr-mir-791

Stem-loop cbr-mir-791

Accession

MI0005426

Description

Caenorhabditis briggsae cbr-mir-791 precursor miRNA

Gene family

MIPF0000370; mir-791

Sequence

gaauucucgaucaccguaucacguguggccaaagucaaauccauuauugaacAUUGGCACUCCGCUGAUUUGGUGaucgacuuuuc
(((...((((((((((.((((.(((.((((((.(((((........))).)).))))).)..))))))).))))))))))...)))

Structure

   uuc          u    c   -u -     a  -   auc 
gaa   ucgaucaccg auca gug  g gccaa gu caa   c
|||   |||||||||| |||| |||  | ||||| || |||    
cuu   agcuaGUGGU UAGU CGC  C CGGUU ca guu   a
   uuc          U    -   CU A     A  a   auu

Annotation confidence Not enough data

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Genome context

chrX: 11146136-11146221 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cbr-mir-791

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbr-miR-791

Accession	MIMAT0004293
Description	Caenorhabditis briggsae cbr-miR-791 mature miRNA
Sequence	53 - AUUGGCACUCCGCUGAUUUGGUG - 75
Evidence	not_experimental

References

PubMed ID: 17174894
Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
"Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP"
"Cell (2006) 127:1193-1207