Stem-loop cbr-mir-242

Accession

MI0005429

Description

Caenorhabditis briggsae cbr-mir-242 precursor miRNA

Gene family

MIPF0000366; mir-242

Sequence

caauucuucuaagccaaaaaaagaauaUUGCGUAGGCCUUUGUUUCGAaagacccaaaaauuguucgcagcaaucuccuucgcaauauuuuuuggaagaggaaaug
...(((((((...(((((....((((((((((.(((...(((((.((((.((........)).)))).)))))...))).))))))))))))))).)))))))...

Structure

caa       aag     aaaa          U   CCU     U    a  ccc 
   uucuucu   ccaaa    gaauaUUGCG AGG   UUGUU CGAa ga   a
   |||||||   |||||    |||||||||| |||   ||||| |||| ||    
   aaggaga   gguuu    uuuauaacgc ucc   aacga gcuu uu   a
gua       --a     ----          u   ucu     c    g  aaa 

Annotation confidence Not enough data

Genome context

chrII: 15031448-15031553 [-]

Mature cbr-miR-242

• Accession: MIMAT0004296
• Description: Caenorhabditis briggsae cbr-miR-242 mature miRNA
• Sequence: 28 - UUGCGUAGGCCUUUGUUUCGA - 48
• Evidence: not_experimental

References

1. PubMed ID: 17174894
   Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
   "Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP"
   "Cell (2006) 127:1193-1207