miRBase entry: cbr-mir-392

Stem-loop cbr-mir-392


Accession
MI0005432
Description
Caenorhabditis briggsae cbr-mir-392 precursor miRNA
Gene family
MIPF0000372; mir-392


Sequence

aaauccugcauuuaucugacaucucacauuauugaggauauaaacuaaauaaagaaaUAUCAUCGAUCAUGUGAGCUGUuagauuaucagauuu
.....(((.((..((((((((.(((((((.(((((.(((((...((......))..))))).))))).))))))).)))))))).)))))....

Structure
aaauc   c  uu        u       u     g     aaa  aa 
     cug au  aucugaca cucacau auuga gauau   cu  a
     ||| ||  |||||||| ||||||| ||||| |||||   ||   
     gac ua  uagauUGU GAGUGUA UAGCU CUAUa   ga  u
-uuua   -  -u        C       C     A     -aa  aa 


Annotation confidence Not enough data
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Genome context
chrX: 19329031-19329124 [+]

Database links

Mature cbr-miR-392

Accession MIMAT0004299
Description Caenorhabditis briggsae cbr-miR-392 mature miRNA
Sequence 58 - UAUCAUCGAUCAUGUGAGCUGU - 79
Evidence not_experimental

References

  1. PubMed ID: 17174894
    Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
    "Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP"
    "Cell (2006) 127:1193-1207