miRBase entry: bta-mir-195

Stem-loop bta-mir-195


Accession
MI0005459
Description
Bos taurus bta-mir-195 precursor miRNA
Gene family
MIPF0000006; mir-15

Literature search
3 open access papers mention bta-mir-195
(6 sentences)

Sequence

22376 reads, 269 reads per million, 66 experiments
agcuccccuggcucUAGCAGCACAGAAAUAUUGGCAcugggaagaaagccugccaauauuggcugugcugcuccaggcaggguggug
.(((.(((((.((..((((((((((.((((((((((..((........))))))))))))..))))))))))..)).))))).))).

Structure
a   c     g  cU          -A          cu  gaa 
 gcu cccug cu  AGCAGCACAG  AAUAUUGGCA  gg   g
 ||| ||||| ||  ||||||||||  ||||||||||  ||    
 ugg gggac ga  ucgucguguc  uuauaaccgu  cc   a
g   u     g  cc          gg          --  gaa 


Annotation confidence High
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Genome context
chr19: 27583214-27583300 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-195
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-195

Accession MIMAT0004335
Description Bos taurus bta-miR-195 mature miRNA
Sequence 15 - UAGCAGCACAGAAAUAUUGGCA - 36
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17306260
    Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
    "Gu Z, Eleswarapu S, Jiang H"
    "FEBS Lett (2007) 581:981-988