miRBase entry: mmu-mir-874

Stem-loop mmu-mir-874


Accession
MI0005479
Symbol
MGI: Mir874
Description
Mus musculus mmu-mir-874 precursor miRNA
Gene family
MIPF0000401; mir-874

Literature search
14 open access papers mention mmu-mir-874
(36 sentences)

Sequence

3762 reads, 69 reads per million, 73 experiments
uuagcccugCGGCCCCACGCACCAGGGUAAGagagacucacuucCUGCCCUGGCCCGAGGGACCGAcuggcugggc
((((((...(((.(((.((..((((((((.(((........))).))))))))..)).))).)))...))))))..

Structure
--      cug   C   A  CA        A   aga 
  uuagcc   CGG CCC CG  CCAGGGUA Gag   c
  ||||||   ||| ||| ||  |||||||| |||    
  ggucgg   GCC GGG GC  GGUCCCGU cuu   u
cg      ucA   A   A  CC        C   cac 


Annotation confidence High
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Genome context
chr13: 58023125-58023200 [-]

Database links

Mature mmu-miR-874-5p

Accession MIMAT0017268
Description Mus musculus mmu-miR-874-5p mature miRNA
Sequence 10 - CGGCCCCACGCACCAGGGUAAG - 31
Evidence experimental
Illumina [3]
Database links
Predicted targets

Mature mmu-miR-874-3p

Accession MIMAT0004853
Description Mus musculus mmu-miR-874-3p mature miRNA
Sequence 45 - CUGCCCUGGCCCGAGGGACCGA - 66
Evidence experimental
cloned [1], Illumina [2-3]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  3. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009