Stem-loop sequence mmu-mir-568

Accession

MI0005517

Symbol

MGI:Mir568

Description

Mus musculus miR-568 stem-loop

Gene family

MIPF0000408; mir-568

Stem-loop

-    -      a      aau           uc        u 
 acac uauauu uguaua   guauacacacu  uauauaug c
 |||| |||||| ||||||   |||||||||||  ||||||||  
 ugug auaugg acauau   uaugugugugg  guauauac c
g    g      -      ---           -c        a 

Deep sequencing

2 reads, 1 experiments

Genome context

• Coordinates (GRCm38): chr16: 43640655-43640737 [+]
• Overlapping transcripts:

  sense

  OTTMUST00000062820 ; Zbtb20-001; exon 15

  ENSMUST00000114694 ; Zbtb20-001; exon 15

Database links

• ENTREZGENE: 100124467;Mir568
• MGI: 3718548;Mir568

Mature sequence mmu-miR-568

• Accession: MIMAT0004892
• Sequence: 11 - auguauaaauguauacacac - 30
• Evidence: by similarity; MI0003574
• Predicted targets:
  • DIANA-MICROT:mmu-miR-568
  • MICRORNA.ORG:mmu-miR-568
  • MIRDB:mmu-miR-568
  • RNA22-MMU:mmu-miR-568
  • TARGETSCAN-VERT:mmu-miR-568

References

1. PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).