Stem-loop mtr-MIR164a

Accession

MI0005573

Description

Medicago truncatula mtr-MIR164a precursor miRNA

Gene family

MIPF0000045; MIR164

Literature search

4 open access papers mention mtr-MIR164a
(67 sentences)

Sequence

cuuguUGGAGAAGCAGGGCACGUGCAaauccucuuucugauucauucucucauaaugcauaucaauaucuuuugcacgugcuccccuucuccaacuagg
((.((((((((((..(((((((((((((.........((((.((((.......))))...))))......)))))))))))))..)))))))))).)).

Structure

-  u          CA             uccucuuuc    --u    cu 
 cu guUGGAGAAG  GGGCACGUGCAaa         ugau   cauu  c
 || ||||||||||  |||||||||||||         ||||   ||||  u
 ga caaccucuuc  cucgugcacguuu         acua   guaa  c
g  u          cc             ---ucuaua    uac    ua 

Annotation confidence Not enough data

Genome context

chr1: 23983784-23983882 [+]

Mature mtr-miR164a

• Accession: MIMAT0011059
• Description: Medicago truncatula mtr-miR164a mature miRNA
• Sequence: 6 - UGGAGAAGCAGGGCACGUGCA - 26
• Evidence: experimental ; 454 [2], Northern [2]

References

1. PubMed ID: 19555436
   Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families
   "Jagadeeswaran G, Zheng Y, Li YF, Shukla LI, Matts J, Hoyt P, Macmil SL, Wiley GB, Roe BA, Zhang W, Sunkar R"
   "New Phytol (2009) 184:85-98


2. 
   "Bonnet E"
   (2007) None: