Stem-loop sequence mtr-MIR166b

Accession

MI0005575 (change log)

Description

Medicago truncatula miR166b stem-loop

Gene family

MIPF0000004; MIR166

Literature search

10 open access papers mention mtr-MIR166b
(44 sentences)

Stem-loop

       a        uu      cu         aacua  -    uu  uuug        a    uu   u      cu          
5' guug ugggaaug  guuugg  cgagguaau     ac ucaa  uc    ucuuugaa gcuu  cuu guuuca  cuuuuugau 
   |||| ||||||||  ||||||  |||||||||     || ||||  ||    |||||||| ||||  ||| ||||||  |||||||| u
3' caac auccuuac  cggacc  gcucuauua     ug aguu  ag    ggaaauuu cgag  gaa caaagu  gaaagauuc 
       c        uu      ag         --gug  u    uu  -uuu        -    -u   u      -u          

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (JCVI_Mt3.5.2): chr2: 950526-950695 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0005575

Mature sequence mtr-miR166b

• Accession: MIMAT0011061
• Sequence: 145 - ucggaccaggcuucauuccua - 165
• Evidence: experimental; Illumina [2]

References

1. " Bonnet E Unpublished (2007).
2. PMID:23572382 "microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula" Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N Planta. 238:91-105(2013).