Stem-loop sequence mtr-MIR156d

Accession

MI0005585 (change log)

Description

Medicago truncatula miR156d stem-loop

Gene family

MIPF0000008; MIR156

Literature search

10 open access papers mention mtr-MIR156d
(77 sentences)

Stem-loop

   -   a         -  -          a    ca -u       g 
5'  gaa uugacagaa ga gagugagcac uaga  c  cgguaua a
    ||| ||||||||| || |||||||||| ||||  |  |||||||  
3'  cuu aacugucuu cu cucacucgug guuu  g  gcuauau u
   c   a         u  a          c    cc uu       g 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr3: 37487558-37487647 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0005585

Mature sequence mtr-miR156d-5p

• Accession: MIMAT0011071
• Sequence: 6 - ugacagaagagagugagcac - 25
• Evidence: experimental; Illumina [2]

Mature sequence mtr-miR156d-3p

• Accession: MIMAT0026725
• Sequence: 64 - ugcucacucaucuuucugucaaa - 86
• Evidence: experimental; Illumina [2]

References

1. " Bonnet E Unpublished (2007).
2. PMID:23572382 "microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula" Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N Planta. 238:91-105(2013).