Stem-loop mtr-MIR399f

Accession

MI0005587

Description

Medicago truncatula mtr-MIR399f precursor miRNA

Literature search

9 open access papers mention mtr-MIR399f
(22 sentences)

Sequence

uuacagggugaguucuccauuggcagguagcuagucacuauaugauaugcauugcaauucaucucuuagugugcaaucUGCCAAAGGAGAUUUGCCCAGcgauu
.....((((((((.((((.(((((((((.((....(((((.((((..(((...)))..))))....))))).)).))))))))).)))))))))))).......

Structure

--uuaca        u    a         a  uagu     ---u    ua   a 
       gggugagu cucc uuggcaggu gc    cacua    auga  ugc  
       |||||||| |||| ||||||||| ||    |||||    ||||  ||| u
       CCCGUUUA GAGG AACCGUcua cg    gugau    uacu  acg  
uuagcGA        -    A         a  ---u     ucuc    ua   u 

Annotation confidence Low

Genome context

chr8: 23166508-23166611 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from mtr-MIR399f

Mature mtr-miR399f

• Accession: MIMAT0011073
• Description: Medicago truncatula mtr-miR399f mature miRNA
• Sequence: 79 - UGCCAAAGGAGAUUUGCCCAG - 99
• Evidence: not_experimental

References

1. 
   "Bonnet E"
   (2007) None: