Stem-loop mtr-MIR166e

Accession

MI0005594

Description

Medicago truncatula mtr-MIR166e precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

9 open access papers mention mtr-MIR166e
(40 sentences)

Sequence

uuugaggGGAAUGUUGGCUGGCUCGAGGcuuuucaguuucacaaaggaaguucagucuuaauuguaugaacuauaaggcuUCGGACCAGGCUUCAUUCCCCucaaa
.((((((((((((..(.((((.((((((((((..(((((.((((...(((......)))..))))..)))))..)))))))))).)))).)..)))))))))))).

Structure

u            UU G    C          uc     -c    agg   uu 
 uugaggGGAAUG  G CUGG UCGAGGcuuu  aguuu  acaa   aag  c
 ||||||||||||  | |||| ||||||||||  |||||  ||||   |||   
 aacuCCCCUUAC  C GACC GGCUucggaa  ucaag  uguu   uuc  a
a            UU G    A          ua     ua    -aa   ug 

Annotation confidence Not enough data

Genome context

chr8: 27465367-27465472 [-]

Mature mtr-miR166e-3p

• Accession: MIMAT0011080
• Description: Medicago truncatula mtr-miR166e-3p mature miRNA
• Sequence: 81 - UCGGACCAGGCUUCAUUCCCC - 101
• Evidence: experimental ; Illumina [2]

Mature mtr-miR166e-5p

• Accession: MIMAT0026726
• Description: Medicago truncatula mtr-miR166e-5p mature miRNA
• Sequence: 8 - GGAAUGUUGGCUGGCUCGAGG - 28
• Evidence: experimental ; Illumina [2]

References

1. 
   "Bonnet E"
   (2007) None:


2. PubMed ID: 23572382
   microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula
   "Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N"
   "Planta (2013) 238:91-105