Stem-loop sequence mtr-MIR166g

Accession

MI0005618 (change log)

Description

Medicago truncatula miR166g stem-loop

Gene family

MIPF0000004; MIR166

Literature search

9 open access papers mention mtr-MIR166g
(40 sentences)

Stem-loop

   u   a        uu      cu      cg    cuucu       ---a    a 
5'  uug ggggaaug  gucugg  cgagga  cuuu     cgaucua    ugca a
    ||| ||||||||  ||||||  ||||||  ||||     |||||||    ||||  
3'  aac ccccuuac  cggacc  gcucuu  gaaa     guuaggu    gugu u
   u   c        uu      ag      au    ----u       acug    u 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (JCVI_Mt3.5.2): chr8: 6508264-6508370 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0005618

Mature sequence mtr-miR166g-5p

• Accession: MIMAT0026730
• Sequence: 8 - ggaauguugucuggcucgagg - 28
• Evidence: experimental; Illumina [2]

Mature sequence mtr-miR166g-3p

• Accession: MIMAT0011104
• Sequence: 82 - ucggaccaggcuucauucccc - 102
• Evidence: experimental; Illumina [2]

References

1. " Bonnet E Unpublished (2007).
2. PMID:23572382 "microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula" Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N Planta. 238:91-105(2013).