Stem-loop mtr-MIR166g

Accession

MI0005618

Description

Medicago truncatula mtr-MIR166g precursor miRNA

Literature search

10 open access papers mention mtr-MIR166g
(46 sentences)

Sequence

20850463 reads, 137030.0 reads per million, 111 experiments

uuugagggGAAUGUUGUCUGGCUCGAGGACgcuuucuucucgaucuaaugcaaauuuguggucauggauuguaaaguauuCUCGGACCAGGCUUCAUUCCCCCcaau
.(((.((((((((..((((((.(((((((.(((((.....(((((((..((.........))..))))))).))))).))))))).))))))..)))))))).))).

Structure

u   a        UU      C       C     cuucu       au  aaa 
 uug gggGAAUG  GUCUGG UCGAGGA gcuuu     cgaucua  gc   u
 ||| ||||||||  |||||| ||||||| |||||     |||||||  ||   u
 aac CCCCUUAC  CGGACC GGCUCuu ugaaa     guuaggu  ug   u
u   C        UU      A       a     ----u       ac  gug 

Annotation confidence High

Genome context

chr8: 6508264-6508370 [-]

Mature mtr-miR166g-5p

• Accession: MIMAT0026730
• Description: Medicago truncatula mtr-miR166g-5p mature miRNA
• Sequence: 9 - GAAUGUUGUCUGGCUCGAGGAC - 30
• Evidence: experimental ; Illumina [2]

Mature mtr-miR166g-3p

• Accession: MIMAT0011104
• Description: Medicago truncatula mtr-miR166g-3p mature miRNA
• Sequence: 81 - CUCGGACCAGGCUUCAUUCCCCC - 103
• Evidence: experimental ; Illumina [2]

References

1. 
   "Bonnet E"
   (2007) None:


2. PubMed ID: 23572382
   microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula
   "Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N"
   "Planta (2013) 238:91-105